Information for 15-TRWSACWARARGA (Motif 28)

A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A C G T A G T C C G A T C G A T A C T G A C G T A T C G C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.781e+00
Information Content per bp:1.814
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif60.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.7 +/- 30.6bp
Average Position of motif in Background51.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TRWSACWARARGA-
ATGTCACAACAACAC
 A C G T A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TRWSACWARARGA
AATATTAATAAAGA-
 A C G T A C G T A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TRWSACWARARGA
-AAAACAAAGG--
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TRWSACWARARGA-
CTCACACAATGGCGC
 A C G T A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TRWSACWARARGA--
-AAGATAAGATAACA
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TRWSACWARARGA-
-------AGAGGAA
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TRWSACWARARGA
-RNAACAATGG--
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TRWSACWARARGA---
TATAGATCAAAGGAAAA
 A C G T A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TRWSACWARARGA
---RACAAWGG--
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TRWSACWARARGA---
-CAAACAACAACACCT
 A C G T C T A G C G A T A T G C C G T A A G T C C G T A C G T A C T A G C G T A C T A G A T C G C G T A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T