p-value: | 1e-4 |
log p-value: | -1.100e+01 |
Information Content per bp: | 1.686 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 21.43% |
Number of Background Sequences with motif | 166.3 |
Percentage of Background Sequences with motif | 0.36% |
Average Position of motif in Targets | 42.8 +/- 2.4bp |
Average Position of motif in Background | 49.8 +/- 22.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGAVAATDDCACHTGA ----ATTAACACCT-- |
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Sox17/MA0078.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA -GACAATGNN------ |
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Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA ----KTTCACACCT-- |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA ------TGACACCT-- |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CGAVAATDDCACHTGA AATAAAGAACAATAGAATTTCA |
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TBX4/MA0806.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA ------TCACACCT-- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGAVAATDDCACHTGA AATGAACAATGGAATT--- |
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TFEC/MA0871.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CGAVAATDDCACHTGA- -------ATCACGTGAC |
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Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA -----TTMACACCTT- |
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Pax6/MA0069.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CGAVAATDDCACHTGA- ---AANTCATGCGTGAA |
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