Information for 12-CCTWTAAMACTTMTAG (Motif 22)

G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
Reverse Opposite:
A T G C A G C T G C T A C A G T G T C A C G T A C T A G C G A T A C G T C G A T G A C T C G T A G C A T G C T A C T A G C A T G
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.623
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif329.2
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets44.5 +/- 18.6bp
Average Position of motif in Background48.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTWTAAMACTTMTAG
CTACCAATAAAATTCT---
 A C G T A C G T A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTWTAAMACTTMTAG
CCAATAAAAC------
 G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTWTAAMACTTMTAG
AACCCAATAAAATTCG---
 A C G T A C G T A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTWTAAMACTTMTAG
AATGCAATAAAATTTAT--
 A C G T A C G T A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTWTAAMACTTMTAG
CCYMATAAAA-------
 A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTWTAAMACTTMTAG
CCAATAAAAA------
 G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTWTAAMACTTMTAG
CCAATAAAAA------
 G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTWTAAMACTTMTAG
NCYAATAAAA-------
 A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTWTAAMACTTMTAG
--KTTCACACCT----
 G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTWTAAMACTTMTAG
NGCAATTAAA-------
 A C G T G A T C A G T C C A G T C G T A C G A T C G T A C G T A T G C A C G T A A G T C C G A T A C G T G T C A C A G T C T G A A T C G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T