Information for 2-CCCAACAATCAAAATA (Motif 2)

G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G C T A C G T A C G T A T C G G T C A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.792
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 36.4bp
Average Position of motif in Background58.0 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
-CCATCAATCAAA---
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
--AAAAAATCAATAAT
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
GCCATAAATCA-----
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCAACAATCAAAATA--
---AACAAACAACAAGAG
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
--AAAAAATCGATAAT
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCAACAATCAAAATA
TCACCCATCAATAAACA--
 A C G T A C G T A C G T G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
----CCAATCAA----
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
--AAAAAATCGATAAT
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCAACAATCAAAATA
-TCATCAATCA-----
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCAACAATCAAAATA
---AACAAT-------
 G T A C G T A C A G T C G T C A C G T A G T A C C G T A C G T A A C G T A T G C G T C A C G T A C T G A C G T A C G A T C G T A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T