Information for 9-TTHTVTTCHTCAT (Motif 19)

A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G C G T A C G T A C T A G C G T A C G T A A C T G C G T A C A T G C T G A T C G A
p-value:1e-6
log p-value:-1.491e+01
Information Content per bp:1.729
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif198.2
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets40.2 +/- 30.7bp
Average Position of motif in Background48.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTHTVTTCHTCAT--
-NTTATTCGTCATNC
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T A C G T A C G T
A C G T C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTHTVTTCHTCAT--
TAGTGATCATCATTA
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTHTVTTCHTCAT------
----TATCATAATTAAGGA
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTHTVTTCHTCAT
-----TTCCTCT-
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTHTVTTCHTCAT
--CTAATCCTCTT
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTHTVTTCHTCAT--
-----GTCGTAAAAT
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTHTVTTCHTCAT-
NTNTTGTTGTTTGTN
 A C G T A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTHTVTTCHTCAT
TCTTTANTAATANN
 A C G T A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTHTVTTCHTCAT
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTHTVTTCHTCAT
--TTAATCCT---
 A G C T A G C T G A T C A C G T T A G C G C A T A C G T A G T C G A C T A C G T G T A C C G T A C G A T
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T