Information for 9-WMCASRARSAMYSCWA (Motif 11)

C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
Reverse Opposite:
A C G T C G T A A C T G A T C G C T A G A C T G A C G T A T C G G A C T A C G T A G C T A T C G A C G T A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.757
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:WMCASRARSAMYSCWA
---ACAAAGGNBCCT-
 C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---WMCASRARSAMYSCWA
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---WMCASRARSAMYSCWA
ATGTACAGTAGCAAAG---
 A C G T A C G T A C G T C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-WMCASRARSAMYSCWA
ATCCAC-----------
 A C G T C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---WMCASRARSAMYSCWA
NWAACCACADNN-------
 A C G T A C G T A C G T C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:6
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:WMCASRARSAMYSCWA------
------AACACTGCAATTGTTC
 C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:WMCASRARSAMYSCWA
---GGGAGGACNG---
 C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--WMCASRARSAMYSCWA
AAACCACAGAN-------
 A C G T A C G T C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:WMCASRARSAMYSCWA
ANCAGGATGT------
 C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:forward strand
Alignment:WMCASRARSAMYSCWA--
---GAAAAAATTGCAAGG
 C G A T G T A C A G T C C G T A A T G C C T G A C G T A C T A G A T G C C G T A G T A C G A C T A T G C A G T C C G A T G T C A A C G T A C G T
A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G