Information for 23-CTAGGATTCA (Motif 53)

A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T A G T C A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.115e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background39.9 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTAGGATTCA---
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTAGGATTCA
--NGGATTAA
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAGGATTCA-
-VRGGATTARN
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTAGGATTCA
--GGGATTAA
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTAGGATTCA-------
---ACATTCATGACACG
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTAGGATTCA----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTAGGATTCA-
--GGGATTANN
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGGATTCA-
--ATGACTCAT
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTAGGATTCA--
-NATGAGTCANN
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C G T
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTAGGATTCA-
-DATGASTCAT
 A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T
A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T