Information for 22-AGCTAACAGA (Motif 52)

C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A C G T C G T A A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.115e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background48.1 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCTAACAGA---
AAAAATAACAAACGG
 A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AGCTAACAGA-
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCTAACAGA---
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCTAACAGA
AGATAASR--
 C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCTAACAGA--
--NHAACBGYYV
 C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTAACAGA--
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCTAACAGA---
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AGCTAACAGA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCTAACAGA
-GTAAACAG-
 C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCTAACAGA
AGATAAGA--
 C G T A A C T G A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G T A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T