Information for 21-AGAAGTCTGGGACTTT (Motif 47)

C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAAGTCTGGGACTTT
RGSMTBCTGGGAAAT-
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGAAGTCTGGGACTTT
---TGTCTGDCACCT-
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGAAGTCTGGGACTTT----
----NNATTGGACTTTNGNN
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAAGTCTGGGACTTT
NNTNNTGTCTGGNNTNG-
 A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAAGTCTGGGACTTT
--CTGTCTGTCACCT-
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAAGTCTGGGACTTT
VBSYGTCTGG------
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAAGTCTGGGACTTT
--CTGTCTGG------
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGAAGTCTGGGACTTT
---GGTCTGGCAT---
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AGAAGTCTGGGACTTT--
--------GGGAATTTCC
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAAGTCTGGGACTTT
--TWGTCTGV------
 C G T A A C T G C G T A C G T A A C T G A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T