Information for 24-GAGAGAGAATGAG (Motif 44)

A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background39.0 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGAGAGAATGAG-----
-AAACATAATGAGGTTGC
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGAGAGAATGAG-----
-GACGATAATGAGCTTGC
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGAGAGAATGAG
TTGACCGAGAATTCC
 A C G T A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGAATGAG-
AGAAAGTGAAAGTGA
 A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGAGAGAATGAG--
-----NTAATGAGCT
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAATGAG
GAAAGTGAAAGT-
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAGAGAGAATGAG
----GACAATGNN
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGAATGAG
-ANAGATAAGAA-
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGAATGAG
--AAAACAATGG-
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAGAGAGAATGAG
----NNNANTGA-
 A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T