Information for 21-CCGGCCTCGACCT (Motif 43)

A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G
p-value:1e-3
log p-value:-7.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGGCCTCGACCT
-TGACCTTGACCT
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGGCCTCGACCT
-TGACCTTGACCT
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGGCCTCGACCT-
GGGGCCGAGGCCTG
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGGCCTCGACCT
-AGGCCTAG----
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCCTCGACCT-
GCTGACCTTGAACTN
A C G T A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCGGCCTCGACCT----
--GACCACGCCCTTATT
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCGGCCTCGACCT-
--GGCCACRCCCMK
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGGCCTCGACCT-
--GGCCCCGCCCCC
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGGCCTCGACCT
-AGGCCTNG----
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGGCCTCGACCT
---GCCMCRCCCH
A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T