Information for 15-GTGCTAATCC (Motif 41)

A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C G T C G T A A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background62.8 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:GTGCTAATCC
--GCTAATCC
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:forward strand
Alignment:GTGCTAATCC--
--GCTAATCCCC
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GTGCTAATCC--
--NYTAATCCYB
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GTGCTAATCC-
--CTTAATCCC
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GTGCTAATCC-
---YTAATCCY
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GTGCTAATCC--
--CCTAATCCGC
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GTGCTAATCC-
---TTAATCCC
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTAATCC----
GNNAGCTAATCCCCCN
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GTGCTAATCC-
---TTAATCCG
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GTGCTAATCC-
---TTAATCCT
 A C T G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T