Information for 4-YSCYAMWSCACMRTKS (Motif 4)

A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
Reverse Opposite:
A T C G G T A C C G T A A G C T A C G T A C T G A C G T A C T G A T C G C G A T A C T G A C G T C T G A A C T G A T C G C T G A
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.775
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 30.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YSCYAMWSCACMRTKS
--SSAATCCACANN--
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS
-TCCAATCCACA----
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS
---NAAACCACAG---
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS
----AAACCACANN--
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS
-----ATCCAC-----
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS
---NWAACCACADNN-
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YSCYAMWSCACMRTKS
----AAACCACAGAN-
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YSCYAMWSCACMRTKS
----AAACCACAGC--
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:YSCYAMWSCACMRTKS-
--------GACAATGNN
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YSCYAMWSCACMRTKS---
--TCACGGAACAATAGGTG
 A G C T A T G C A G T C A G C T C G T A G T A C C G T A A T G C A G T C C G T A A G T C G T C A C T G A A C G T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G