Information for 3-TGMAMGKWCAMARKAR (Motif 3)

A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
Reverse Opposite:
A G T C C G A T G T C A A G T C A C G T A C T G A C G T A C T G C G A T G T A C A G T C A C G T A C G T A C G T A G T C C G T A
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.811
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 24.8bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGMAMGKWCAMARKAR
---AAGGTCAC-----
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGMAMGKWCAMARKAR
--CAAGGHCANV----
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGMAMGKWCAMARKAR
TCTCAAAGGTCACGAG--
 A C G T A C G T A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGMAMGKWCAMARKAR
TCTCAAAGGTCACCTG--
 A C G T A C G T A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGMAMGKWCAMARKAR
-TCAAGGTCAN-----
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGMAMGKWCAMARKAR
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGMAMGKWCAMARKAR
--AAAGATCAAAGG--
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGMAMGKWCAMARKAR
ANGNAAAGGTCA------
 A C G T A C G T A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGMAMGKWCAMARKAR
-CAAAGGTCAAGGG--
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGMAMGKWCAMARKAR-
--AAAGATCAAAGGGTT
 A C G T A C T G G T C A C G T A G T C A A C T G A C T G C G T A A G T C C G T A G T A C C G T A C T A G A C G T C G T A C T A G A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T