Information for 12-CAGABBCAAGCTT (Motif 24)

A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G C T A C G T A C T G T A C G T A C G A C G T A T G C A C G T A C T G
p-value:1e-6
log p-value:-1.498e+01
Information Content per bp:1.833
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 3.1bp
Average Position of motif in Background47.4 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.78
Offset:6
Orientation:forward strand
Alignment:CAGABBCAAGCTT
------CAAGCTT
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CAGABBCAAGCTT
--------NGCTN
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGABBCAAGCTT
-CGCCTCAGGCA-
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGABBCAAGCTT
-AGCCTCAGGCA-
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGABBCAAGCTT
-AGCCTCAGGCA-
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CAGABBCAAGCTT
------CACGCA-
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGABBCAAGCTT
-----CNAGGCCT
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CAGABBCAAGCTT--
---------GCTTCC
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGABBCAAGCTT------
---NGTCACGCTTGGCTGC
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGABBCAAGCTT---
--AANTCATGCGTGAA
 A G T C C G T A A T C G G T C A A C G T A C G T A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A