p-value: | 1e-6 |
log p-value: | -1.553e+01 |
Information Content per bp: | 1.756 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 21.05% |
Number of Background Sequences with motif | 123.6 |
Percentage of Background Sequences with motif | 0.26% |
Average Position of motif in Targets | 51.2 +/- 34.4bp |
Average Position of motif in Background | 48.3 +/- 29.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0067.1_Hoxc12/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTTACGGCCC-- GNNNTTTTACGACCTNA |
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HOXC12/MA0906.1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTACGGCCC NTTTTACGACC- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTACGGCCC DGWTTTATGRCN- |
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HOXC11/MA0651.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTACGGCCC NTTTTACGACC- |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTTACGGCCC-- NNNATTTTACGACNNTN |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTACGGCCC NTTTTACGACT- |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTTACGGCCC-- ANNATTTTACGACNTNA |
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FOXI1/MA0042.2/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTACGGCCC TGTTTAC----- |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTACGGCCC ANTTTTACGACC- |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTACGGCCC-- ANNTTTTACGACNTNN |
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