Information for 11-ACYSAGKGSKRRA (Motif 20)

C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
Reverse Opposite:
A C G T A G T C A G C T G T C A A T C G A G T C G T A C A G T C A C G T A T G C C T G A A C T G A C G T
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.798
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.3 +/- 35.0bp
Average Position of motif in Background52.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACYSAGKGSKRRA
-TTRAGTGSYK--
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACYSAGKGSKRRA
--GGAGGGGGAA-
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACYSAGKGSKRRA
-TTGAGTGSTT--
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACYSAGKGSKRRA--
-----GGGCGGGACC
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACYSAGKGSKRRA--
TGCGGAGTGGGACTGG
 A C G T C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACYSAGKGSKRRA
BTBRAGTGSN---
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACYSAGKGSKRRA
GGCACCCAGGGGTGC-
 A C G T A C G T A C G T C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACYSAGKGSKRRA
CTTGAGTGGCT--
 C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ACYSAGKGSKRRA
GCCTCAGGGCAT--
 A C G T C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ACYSAGKGSKRRA
GTCCCCAGGGGA---
 A C G T A C G T C G T A A G T C A G C T A T C G C G T A A C T G C A G T A C T G A T G C A C G T C T G A C T A G C G T A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T