Information for 4-CTTGVGTTCCHTT (Motif 10)

A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
Reverse Opposite:
C G T A C G T A C A G T A C T G T C A G C T G A C T G A A G T C A C G T A T G C C G T A C G T A A C T G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.797
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif47.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.0 +/- 29.0bp
Average Position of motif in Background49.6 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGVGTTCCHTT
ACTTTCGTTTCT--
 A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTGVGTTCCHTT
CTTGAGTGGCT--
 A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CTTGVGTTCCHTT
GCTGACCTTGAACTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTGVGTTCCHTT
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTGVGTTCCHTT
TGACCTTGAN-------
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CTTGVGTTCCHTT
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTGVGTTCCHTT
TGACCTTGAV-------
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTTGVGTTCCHTT
NNACTTGCCTT-----
 A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGVGTTCCHTT
GCACCCCTGGGTGCC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTGVGTTCCHTT
-TKCTGTTCCA--
 A G T C A C G T A C G T A T C G T C G A A C T G A G C T A G C T A G T C A G T C G C T A A C G T C G A T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T