Information for 1-CHCDAAAAGGGCCTAT (Motif 1)

T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
Reverse Opposite:
T G C A A C G T C T G A C T A G A T C G A T G C G T A C A G T C A G C T A C G T A G C T A C G T G C A T C T A G C A T G A T C G
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.708
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.5 +/- 20.3bp
Average Position of motif in Background56.6 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT
--------AGGCCTAG
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT
--------AGGCCTNG
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CHCDAAAAGGGCCTAT
GNCTATAAAAGG------
 A C G T A C G T T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT
--GGAGAAAGGTGCGA
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT---
---AAAATGGCGCCATTTT
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT
-----AAGAGGATTAG
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0126.1_Obox6/Jaspar

Match Rank:7
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CHCDAAAAGGGCCTAT--
---AAAAACGGATTATTG
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CHCDAAAAGGGCCTAT----
---NNNTNGGGCGTATNNTN
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CHCDAAAAGGGCCTAT
TCCCAGMCRAGCCCC--
 A C G T T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:CHCDAAAAGGGCCTAT
-------NGGGATTA-
 T A G C G T A C A G T C C G T A T G C A C T G A G T C A C T G A C T A G A C T G A T C G A T G C A G T C A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T