Information for 1-CACCACAATG (Motif 9)

A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A G C T A C T G C T A G A C G T A C T G
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.926
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets82.0 +/- 10.0bp
Average Position of motif in Background41.8 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CACCACAATG--
---GACAATGNN
 A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CACCACAATG
AAACCGCAA--
 A C G T A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACCACAATG
AAACCGCAAA-
 A C G T A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACCACAATG
NWAACCACADNN
 A C G T A C G T A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CACCACAATG
----ACAAAG
 A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACCACAATG-
-RNAACAATGG
 A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACCACAATG-
-VRRACAAWGG
 A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACCACAATG-
-VRAACAATGG
 A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACCACAATG------
NNTNNACAATGGGANNN
 A C G T A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCACAATG
NAAACCACAG--
 A C G T A C G T A G T C C G T A A G T C A G T C C T G A A G T C C G T A C G T A A C G T A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T