Information for 3-MTRWTMKCATTWC (Motif 7)

G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A C T G A A C G T A C T G T G C A A C T G C G T A G C A T A G T C C T G A A C T G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.814
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.5 +/- 18.8bp
Average Position of motif in Background52.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:MTRWTMKCATTWC
-TAATCHGATTAC
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MTRWTMKCATTWC
YTAATYNRATTA-
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MTRWTMKCATTWC
NTAATBNAATTA-
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MTRWTMKCATTWC-
NATGACATCATCNNN
 A C G T G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MTRWTMKCATTWC
-TAATTTAATTA-
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MTRWTMKCATTWC
-TAATTTAATTA-
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

PH0103.1_Meox1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MTRWTMKCATTWC---
CTGAGGTAATTACCNC
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MTRWTMKCATTWC
-TAATTTAATTA-
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:MTRWTMKCATTWC-
------YCATTAMC
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MTRWTMKCATTWC
-GKMTCADRTTWC
 G T A C A G C T C T A G C G T A A C G T G T A C A C G T A G T C G T C A A G C T A C G T C G T A A G T C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C