Information for 18-TTCAAAAACG (Motif 52)

A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A
p-value:1e-2
log p-value:-6.876e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background21.5 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAACG
NATTCAAAT---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAACG
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAACG-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAACG---
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCAAAAACG-------
NNTAAAAACGATGTTNT
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAACG
ACATCAAAGG--
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCAAAAACG
--NANANAC-
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCAAAAACG------
CATACAATACGAAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TTCAAAAACG
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAAAACG-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G