Information for 24-ATTCGTTCCTTGG (Motif 48)

C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G A C T G C G T A C G T A A G T C A C T G C G T A C G T A A C G T
p-value:1e-3
log p-value:-7.569e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATTCGTTCCTTGG
ACTTTCGTTTCT---
 A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATTCGTTCCTTGG---
-NCCGTTGCTANGNGN
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATTCGTTCCTTGG
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATTCGTTCCTTGG-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATTCGTTCCTTGG
TTATTAGTACATAN-
 A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATTCGTTCCTTGG---
-NNCGTTGCTATGGNN
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATTCGTTCCTTGG-
-TTACTTCCTNGTN
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATTCGTTCCTTGG-
--CTGTTGCTAGGS
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATTCGTTCCTTGG--
-----TTCCKNAGAA
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATTCGTTCCTTGG
--GCATTCCAGN-
 C G T A A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T