Information for 4-TTTACAGGCG (Motif 41)

A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.569e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGGCG---
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTACAGGCG
TTGACAGC--
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGGCG
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTTACAGGCG
CCTTTTATAGNC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTACAGGCG
TTGACAGG--
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGGCG---
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGGCG---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAGGCG
TGTTTACH----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAGGCG
NTTTTACGAGN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTACAGGCG--
--NNCAGGTGNN
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G