Information for 2-ACCTAATTAT (Motif 40)

C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G A C T G A C G T
p-value:1e-3
log p-value:-7.569e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAATTAT----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAATTAT----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ACCTAATTAT
AGCTCATTAT
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:ACCTAATTAT
-NCTAATTA-
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T

VSX2/MA0726.1/Jaspar

Match Rank:5
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ACCTAATTAT
--CTAATTAG
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

PH0143.1_Pou2f1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ACCTAATTAT-----
TACTTAATTAATNNAN
 A C G T C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

VSX1/MA0725.1/Jaspar

Match Rank:7
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ACCTAATTAT
--CTAATTAT
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:ACCTAATTAT
--CTAATTAA
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ACCTAATTAT-
-CCTAATTATC
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

LHX2/MA0700.1/Jaspar

Match Rank:10
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ACCTAATTAT-
-ACTAATTAAC
 C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C