Information for 15-CCRMCTCRARCSC (Motif 31)

A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
Reverse Opposite:
A C T G A T C G A T C G A G C T A C G T A G C T A C T G C G T A A C T G A C G T A G C T A C T G A C T G
p-value:1e-6
log p-value:-1.388e+01
Information Content per bp:1.819
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets62.3 +/- 29.3bp
Average Position of motif in Background44.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCRMCTCRARCSC
NNAGTCCCACTCNNNN--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCRMCTCRARCSC
GCCCCGCCCCCTCCC-
 A C G T A C G T A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCRMCTCRARCSC
ATCCCCGCCCCTAAAA-
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

CENPB/MA0637.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCRMCTCRARCSC-
CCCGCATACAACGAA
 A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C A C G T
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCRMCTCRARCSC-
--GGCTCYAKCAYC
 A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCRMCTCRARCSC
NSCACTYVAV---
 A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCRMCTCRARCSC
TCACCCCGCCCCAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCRMCTCRARCSC-
TCCCAGMCRAGCCCC
 A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCRMCTCRARCSC
GCCCCGCCCCC-----
 A C G T A C G T A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCRMCTCRARCSC
AGCCACTCAAG---
 A C G T A G T C A G T C C T G A T G A C A G T C A C G T A G T C T C G A G T C A C T G A A T G C A T G C G T A C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T