Information for 14-SCMARCTTKYMKAMRR (Motif 21)

A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
Reverse Opposite:
A G C T A G C T A C G T A C G T G T A C A C G T C T G A G T A C C G T A C G T A A C T G A G C T A C G T A C G T A C T G A T C G
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.775
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.7 +/- 4.9bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SCMARCTTKYMKAMRR
-CAAGCTT--------
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---SCMARCTTKYMKAMRR
GCNGCCATCTTG-------
 A C G T A C G T A C G T A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---SCMARCTTKYMKAMRR
NNNNCAACCTTCGNGA---
 A C G T A C G T A C G T A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---SCMARCTTKYMKAMRR
GCCGCCATCTTG-------
 A C G T A C G T A C G T A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SCMARCTTKYMKAMRR
-CCAGCTGTTN-----
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SCMARCTTKYMKAMRR
GCCATCTGTT------
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:SCMARCTTKYMKAMRR
--AACCTTATAT----
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:SCMARCTTKYMKAMRR
-GAANGTTCTAGAA--
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:SCMARCTTKYMKAMRR
-----VTTRCATAAY-
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:SCMARCTTKYMKAMRR
----CCTTTTATAGNC
 A T G C A G T C G T C A C G T A C T G A A G T C A C G T A C G T A C T G A G C T G T C A A C T G C G T A G T C A C T G A C T G A
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C