Information for 4-AGGCCTAAAAAAC (Motif 15)

C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A C G T A C G T C G A T A C G T C T G A A C T G C T A G A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.819
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.7 +/- 22.5bp
Average Position of motif in Background47.5 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTAAAAAAC
CNAGGCCT-------
 A C G T A C G T C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGGCCTAAAAAAC-
--GNCTATAAAAGG
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGCCTAAAAAAC
---CCAATAAAAC
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTAAAAAAC
CTAGGCCT-------
 A C G T A C G T C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGCCTAAAAAAC
--NGCAATTAAA-
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGCCTAAAAAAC
--CCYMATAAAA-
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCCTAAAAAAC---
CTACCAATAAAATTCT
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGCCTAAAAAAC
---CCAATAAAAA
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGCCTAAAAAAC
--NCYAATAAAA-
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCCTAAAAAAC---
AACCCAATAAAATTCG
 C G T A C T A G A C T G A G T C A G T C A G C T G T C A C G T A G T C A C G T A C G T A C G T A A T G C A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G