p-value: | 1e-8 |
log p-value: | -1.979e+01 |
Information Content per bp: | 1.799 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 12.00% |
Number of Background Sequences with motif | 5.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 49.3 +/- 16.2bp |
Average Position of motif in Background | 42.7 +/- 31.6bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCYYSSAAAKGCYCWM ----GGAAATTCCC-- |
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RELA/MA0107.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCYYSSAAAKGCYCWM ----GGAAATTCCC-- |
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MF0003.1_REL_class/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCYYSSAAAKGCYCWM ----GGAAATCCCC-- |
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REL/MA0101.1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCYYSSAAAKGCYCWM ----GGAAANCCCC-- |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCYYSSAAAKGCYCWM ---GGGAAATCCCCN- |
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E2F8/MA0865.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCYYSSAAAKGCYCWM TTTCCCGCCAAA------- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | CCYYSSAAAKGCYCWM- --------ATGCCCACC |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCYYSSAAAKGCYCWM---- ----GGGTGTGCCCAAAAGG |
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PB0143.1_Klf7_2/Jaspar
Match Rank: | 9 |
Score: | 0.48 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCYYSSAAAKGCYCWM--- --AAGCATACGCCCAACTT |
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MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCYYSSAAAKGCYCWM -----YAACBGCC--- |
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