Information for 5-GTGGCTCBCDTCCCAG (Motif 7)

A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A C T G A C T G G T C A G A C T A C T G T A C G C T A G C T G A A C T G A G T C G T A C C T G A G T A C
p-value:1e-7
log p-value:-1.702e+01
Information Content per bp:1.727
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.82%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.7 +/- 16.1bp
Average Position of motif in Background44.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGGCTCBCDTCCCAG
TTGGCANNNTGCCAAG
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG
-TGGCACCATGCCAA-
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:GTGGCTCBCDTCCCAG---
---------TGCCCAGNHW
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG
CTGGCAGNCTGCCA--
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGGCTCBCDTCCCAG----
---NNNTCCATCCCATAANN
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG-
-------HTTTCCCASG
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG----
----CCGTCTTCCCCCTCAC
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GTGGCTCBCDTCCCAG---
--------TTTCCCAGAAN
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG
-TGACCTTTGCCCCA-
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GTGGCTCBCDTCCCAG------
-------ATTTCCCAGVAKSCY
 A C T G A G C T A C T G C T A G A G T C A G C T A G T C A G T C G T A C C G T A A C G T A G T C A G T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C