Information for 5-GACAGCAGAT (Motif 3)

A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
Reverse Opposite:
C G T A A G C T A G T C A C G T C T A G A G T C A C G T A C T G A C G T T A G C
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.850
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets40.2 +/- 24.3bp
Average Position of motif in Background51.8 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCAGAT
AGAGRRACAGCWGAC
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

TFAP4/MA0691.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACAGCAGAT
AACAGCTGAT
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACAGCAGAT-
GTCAGCANNTN
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCAGAT--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GACAGCAGAT-
-HCAGCTGDTN
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GACAGCAGAT
--CAGCTGNT
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACAGCAGAT-
-NCAGCTGCTG
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T A C G T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GACAGCAGAT---
---AACAGATGGT
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACAGCAGAT
AACAGCTG--
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAGCAGAT
CACAGN----
 A C T G G T C A T G A C C G T A A C T G G A T C C G T A A C T G T C G A A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T