Information for 4-GGAGGATGGA (Motif 11)

A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A
Reverse Opposite:
A C G T T G A C G T A C G C T A A C G T A T G C G T A C G C A T A G T C A G T C
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.740
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif935.2
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets63.0 +/- 22.5bp
Average Position of motif in Background48.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGATGGA
GGGAGGACNG-
 A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAGGATGGA-------
GGAAGGAAGGAAGGAAGG
 A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAGGATGGA----
--ATGATKGATGRC
 A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GGAGGATGGA
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGGATGGA-----------
GGAGGAGGAGGGGGAGGAGGA
 A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGATGGA-
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGATGGA
GTGGGGGAGGGG
 A C G T A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGATGGA-
NDCAGGAARTNN
 A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGATGGA--
GGGGGGGGGGGGGGA
 A C G T A C G T A C G T A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGGATGGA-
GGGGGCGGGGC
 A C T G C T A G C G T A A C T G A T C G G T C A C G A T C A T G A C T G G T C A A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C