Information for 5-ATGTTACTTC (Motif 5)

G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C
Reverse Opposite:
C T A G T G C A C T G A T A C G C G A T T C G A T C G A G A T C G C T A C A G T
p-value:1e-12
log p-value:-2.885e+01
Information Content per bp:1.522
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif678.3
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets48.0 +/- 27.1bp
Average Position of motif in Background51.4 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------ATGTTACTTC
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTACTTC-
AGGGAAGTCATTTCT
 A C G T A C G T A C G T A C G T G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTACTTC-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ATGTTACTTC-
-----GCTTCC
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGTTACTTC--
GTTTCACTTCCG
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATGTTACTTC------
---TTACTTCCTNGTN
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

ETV6/MA0645.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATGTTACTTC----
----CACTTCCGCT
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGTTACTTC---
AGATGCTRCTRCCHT
 A C G T A C G T G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATGTTACTTC-------
---NNACTTCCTCTTNN
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGTTACTTC-
--TTGACTTTT
 G T C A C G A T C T A G A G C T A G C T G C T A A T G C A G C T A C G T G A T C A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T