Information for 4-GCGGMAGAGG (Motif 2)

A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G
Reverse Opposite:
T A G C G T A C A G C T G T A C A C G T A C G T G T A C G A T C A T C G T G A C
p-value:1e-17
log p-value:-3.995e+01
Information Content per bp:1.700
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif7.33%
Number of Background Sequences with motif737.2
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets53.1 +/- 25.4bp
Average Position of motif in Background50.1 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGGMAGAGG-
CCGGAAGTGGC
 A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ETV6/MA0645.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGGMAGAGG
AGCGGAAGTG-
 A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGMAGAGG
--GGGGGGGG
 A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

ELK4/MA0076.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGGMAGAGG
NCCGGAAGTGG
 A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGGMAGAGG---------
GCCASCAGGGGGCGCYVNNG
 A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGMAGAGG
GTGGGGGAGGGG
 A C G T A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCGGMAGAGG---
TGGGGCAAAGGTCA
 A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGMAGAGG---
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGMAGAGG---
GGCGGGGGCGGGGG
 A C G T A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGGMAGAGG--------
-GGCGAGGGGTCAAGGGC
 A C T G T A G C C T A G C A T G T G C A G T C A A C T G T C G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C