Information for 13-TGTTTTAGTAATC (Motif 18)

A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
Reverse Opposite:
C A T G C T G A C G A T C G A T T G C A A G T C C G A T G T C A C G T A C G T A C T G A A G T C C G T A
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.717
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif106.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets37.1 +/- 22.0bp
Average Position of motif in Background49.5 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTTAGTAATC
NNTTTTGTTTTGATNT--
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTTTTAGTAATC--
-TCTTTANTAATANN
 A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTTTTAGTAATC-
CCGTATTATAAACAA
 A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTTAGTAATC
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTTTTAGTAATC
TGAATTATGCAT-
 A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTTAGTAATC
TTCTATTTTTAGNNN-
 A C G T A C G T A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTTTTAGTAATC
-ATATTAATTAA-
 A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTTTTAGTAATC
ATGAATAATTAATG
 A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTTAGTAATC
TCATGAATWATTCAT-
 A C G T A C G T A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTTTTAGTAATC--
ATGCATAATTAATGAG
 A C G T A C G T T A C G A G C T C G A T A C G T A C G T C G T A T C A G A C G T G C T A C G T A A G C T G T A C A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G