Information for 2-CCCTTAATTT (Motif 8)

G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T
Reverse Opposite:
T C G A C T G A C G T A A C G T G A C T C G T A C G T A A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.852
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.6 +/- 17.7bp
Average Position of motif in Background53.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCCTTAATTT-
---TTAATTAN
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTAATTT----
TNCCATTAATTACTNC
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PRRX1/MA0716.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCTTAATTT-
---NTAATTAN
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G

SHOX/MA0630.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCCTTAATTT-
---TTAATTGG
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G

UNCX/MA0721.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCTTAATTT-
---NTAATTAN
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTAATTT-----
ANNCATTAATTGCTNGN
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTAATTT-----
ANNCATTAATTGCTNGN
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAATTT
ACCACTTAA---
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCTTAATTT-
---NTAATTGN
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G

LMX1A/MA0702.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCTTAATTT-
---TTAATTAA
 G T A C A G T C A G T C A C G T A C G T C T G A C G T A G C A T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A