Information for 15-GCCCGCGGTG (Motif 27)

C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C T G A G T C C T A G A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.944
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif80.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.5 +/- 24.8bp
Average Position of motif in Background55.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCCGCGGTG-
-CCTGCTGAGH
 C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCCGCGGTG---
NNTCCTGCTGTGNNN
 A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCGGTG-
GACCCCCCGCTGTGC
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCGGTG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCGCGGTG---
TNTCCTGCTGTGNNG
 A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCGGTG
GACCCCCCGCTGTG
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCGGTG-
GACCCCCCGCTGCGC
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCCGCGGTG--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCGGTG
GGCACGTGCC-
 A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCCGCGGTG--
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T C T A G A G T C A G T C A G T C A C T G A G T C A C T G A C T G A C G T C T A G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A