Information for 9-GAGGAGCTCTACA (Motif 26)

A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C T G C G T A A C T G A G T C A G C T A G T C A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.0 +/- 13.6bp
Average Position of motif in Background39.6 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGAGCTCTACA
-CGGAGC------
 A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAGCTCTACA--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGGAGCTCTACA
----NGCTN----
 A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGCTCTACA
NRRGGGTCTT----
 A C G T A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GAGGAGCTCTACA
RGKGGGCGGAGC------
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

BATF3/MA0835.1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGCTCTACA
TGATGACGTCATCA
 A C G T A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGGAGCTCTACA
-GGGAGGACNG--
 A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GAGGAGCTCTACA-
----NSCACTYVAV
 A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GAGGAGCTCTACA
GGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GAGGAGCTCTACA---
----GGCTCYAKCAYC
 A C T G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A G T C C G A T G T C A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C