Information for 5-TTGGTGAGAG (Motif 14)

A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G
Reverse Opposite:
A G T C A G C T A G T C G A C T T G A C G T C A G T A C A T G C T C G A T G C A
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.655
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.13%
Number of Background Sequences with motif1423.2
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets53.3 +/- 26.6bp
Average Position of motif in Background50.5 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTGGTGAGAG-
GGTGYTGACAGS
 A C G T A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGTGAGAG
ATGGGGTGAT
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

E2F8/MA0865.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTGAGAG-
TTTGGCGGGAAA
 A C G T A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTGGTGAGAG
-AGGTGTGA-
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTGAGAG--
TTTTGGCGGGAAAA
 A C G T A C G T A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGGTGAGAG
GTGGGGTGAT
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTGGTGAGAG---
--CTTGAGTGGCT
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGGTGAGAG--
GTGGCGTGACNG
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGTGAGAG----
-AGGTGNCAGACAG
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGGTGAGAG
-AGGTGTGA-
 A C G T A G C T T A C G C A T G C A G T A C T G C T G A T C A G T C G A T C A G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T