Information for 5-CCTTAGGCTCAGC (Motif 10)

A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A A C T G A G T C A G T C A C G T T C G A C T G A A C T G A C T G
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.4 +/- 26.7bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCTTAGGCTCAGC
AGCCTCAGGCA----
 A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGCTCAGC
TGCCTGAGGCN----
 A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTTAGGCTCAGC
CGCCTCAGGCA----
 A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTCAGC
NTNGCCTCAGGCNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTCAGC
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGCTCAGC
ATGCCCTGAGGC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTCAGC
ANTGCCTGAGGCAAN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTCAGC
NTCGCCTCAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTCAGC
NTCCCCTCAGGGANT--
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCTTAGGCTCAGC---
------DCTCAGCAGG
 A G T C A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G