Information for 7-RRCGAWGKSGGRGACC (Motif 23)

C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A G T C A G T C A G T C A T G C G T A C A G T C C G T A A G C T G T A C A C T G A G T C A G C T
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.842
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 29.7bp
Average Position of motif in Background26.7 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC
------GGGCGGGACC
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC----
---GCTGGGGGGTACCCCTT
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC
--------TGGGGA--
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:RRCGAWGKSGGRGACC
----GTGGGGGGGG--
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RRCGAWGKSGGRGACC
GGCGGGGGCGGGGG--
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:RRCGAWGKSGGRGACC
---GGGGGCGGGGC--
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC----
----TTGGGGGCGCCCCTAG
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----RRCGAWGKSGGRGACC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC
-----GGGGGGGG---
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:RRCGAWGKSGGRGACC--
------GGGGGAATCCCC
 C T G A C T A G A G T C A C T G C T G A C G A T A C T G A C T G A T C G A C T G C T A G C T A G C T A G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C