Information for 5-GAGAACCGCTCCCAGG (Motif 19)

A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G A C T G A C T G G T C A A C T G A G T C T A C G A C T G A C G T A C G T A G T C C G A T A G T C
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.921
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 26.8bp
Average Position of motif in Background32.0 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG
-------GCTCCG---
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAGAACCGCTCCCAGG
----GCCCCACCCA--
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG----
RACTACAACTCCCAGVAKGC
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG
---GGCCACACCCA--
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG
----GCCCCGCCCC--
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAGAACCGCTCCCAGG
---GGCCACACCCAN-
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG-
--NRGCCCCRCCCHBNN
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GAGAACCGCTCCCAGG
---GGCCACRCCCMK-
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGAACCGCTCCCAGG
-GGCCCCGCCCCC---
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GAGAACCGCTCCCAGG
-----CCCCCCCC---
 A C T G C G T A A C T G T C G A C G T A A G T C A T G C A C T G A G T C A C G T A G T C G T A C A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T