Information for 16-ACTTATAAGT (Motif 45)

C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
p-value:1e-3
log p-value:-6.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets15.5 +/- 0.5bp
Average Position of motif in Background36.7 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ACTTATAAGT---
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT
ACCACTTAA----
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTTATAAGT
AACCTTATAT--
 A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT---
GCTAATTATAATTATC
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT----
AGAACTAATTAGTGGAC
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT
ACCACTTAA----
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACTTATAAGT
CAATTAA----
 A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T

PH0027.1_Emx2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT----
ACCACTAATTAGTGGAC
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTTATAAGT---
TATAATTATAATATTC
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATAAGT---
NNTAATTATAATNANN
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A