Information for 5-CTGTSCAAASCAGCCC (Motif 6)

A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
Reverse Opposite:
A C T G C T A G C A T G A G T C C G A T C T A G A T G C A C G T A C G T C G A T A C T G A T G C G T C A A G T C C G T A C T A G
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.819
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 19.6bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGTSCAAASCAGCCC
-TGWCCTCARNTGACC
 A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTSCAAASCAGCCC
GCTGTG-----------
 A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGTSCAAASCAGCCC
CAGATGTGCACATACGT--
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGTSCAAASCAGCCC
CTGTTCCTGG------
 A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGTSCAAASCAGCCC
TACATGTGCACATAAAA--
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CTGTSCAAASCAGCCC
GGGCCGTGTGCAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTSCAAASCAGCCC
GTGCCGTGTGCAAA-------
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTSCAAASCAGCCC
SCTGTCARCACC-----
 A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGTSCAAASCAGCCC
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTGTSCAAASCAGCCC
ACTATGCCAACCTACC-
 A C G T A G T C A C G T A C T G A C G T A T C G A G T C C G T A G T C A G T C A A T C G A G T C G C T A A C T G G T A C A G T C A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T