Information for 2-GGGACCTCRCYCA (Motif 5)

A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G C T G A C T A G A G T C A C T G C T G A A C T G C T A G A C G T A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.805
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.8 +/- 24.8bp
Average Position of motif in Background53.0 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGACCTCRCYCA
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGACCTCRCYCA---
GAGCCCTTGTCCCTAA
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGACCTCRCYCA----
--GACCACGCCCTTATT
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGACCTCRCYCA
-GSCTGTCACTCA
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGACCTCRCYCA
GARTGGTCATCGCCC-
 A C G T A C G T A C G T A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGACCTCRCYCA---
TCGACCCCGCCCCTAT
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGACCTCRCYCA
--GGCCACACCCA
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGACCTCRCYCA---
-NRGCCCCRCCCHBNN
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGACCTCRCYCA
---GCCCCACCCA
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGACCTCRCYCA
GGGGATTCCCCC-
 A C T G A C T G A C T G G T C A A G T C T A G C A G C T A G T C C T A G A G T C A G C T A G T C C G T A
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T