Information for 6-AGGCACACTG (Motif 13)

C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G A C G T A C T G A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.949
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.1 +/- 17.4bp
Average Position of motif in Background51.7 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACTG
CCAGGAACAG--
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACTG----
CGAAGCACACAAAATA
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGCACACTG----
AGCGGCACACACGCAA
 A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCACACTG-------
AATCGCACTGCATTCCG
 C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACACTG----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACACTG---
NNTTTGCACACGGCCC
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGGCACACTG--
---GACAATGNN
 C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGGCACACTG
----ACAAAG
 C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACACTG
NGTGGGCAT----
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGCACACTG-
-VRRACAAWGG
 C G T A A C T G A C T G A G T C C G T A G T A C C G T A A G T C A C G T C T A G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G