Information for 1-GMSRCCRGRGGGMGCC (Motif 1)

A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A G C T A C T G A C T G A G T C A T C G A C T G A T G C
p-value:1e-15
log p-value:-3.683e+01
Information Content per bp:1.851
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.1 +/- 20.6bp
Average Position of motif in Background33.9 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GMSRCCRGRGGGMGCC----
GCCASCAGGGGGCGCYVNNG
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GMSRCCRGRGGGMGCC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GMSRCCRGRGGGMGCC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GMSRCCRGRGGGMGCC-----
-----TTGGGGGCGCCCCTAG
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GMSRCCRGRGGGMGCC
CACCCCCGGGGGGG--
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GMSRCCRGRGGGMGCC
--TGCCCNGGGGCA--
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GMSRCCRGRGGGMGCC
--------AGCGCGCC
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GMSRCCRGRGGGMGCC
--TGTCAGGGGGCG--
 A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMSRCCRGRGGGMGCC
NCCCCCCCGGGGGGN--
 A C G T A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMSRCCRGRGGGMGCC
ACCCCCCCGGGGGGN--
 A C G T A T C G G T A C A T G C C T A G A G T C A G T C C T G A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A T G C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T