Information for 4-GGAAAATCCAGGGCAT (Motif 8)

A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A G T C A G T C A G T C A C G T A C T G A T C G G T C A A G C T A C G T A C G T A G C T A G T C G T A C
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 26.7bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAAAATCCAGGGCAT
GGAAATTCCC------
 A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAAATCCAGGGCAT
GGAAANCCCC------
 A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAAAATCCAGGGCAT
GGAAATTCCC------
 A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAAAATCCAGGGCAT
GGAAATCCCC------
 A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATCCAGGGCAT
AATGGAAAAT---------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAATCCAGGGCAT
TGGAAAA----------
 A C G T A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATCCAGGGCAT
NNTGGAAANN---------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATCCAGGGCAT
NATGGAAAAN---------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAAAATCCAGGGCAT
--ACATGCCCGGGCAT
 A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAATCCAGGGCAT
AATGGAAAAT---------
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A C T G A A C G T A T G C A G T C G T C A C T A G A C T G A C T G A G T C C G T A A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T