Information for 3-CCCTTTCGCCTTG (Motif 4)

A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
Reverse Opposite:
A T G C T G C A C G T A A C T G A C T G A T G C A C T G T C G A T G C A C G T A A C T G C T A G A T C G
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.784
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif121.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets47.9 +/- 25.2bp
Average Position of motif in Background48.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTCGCCTTG-
TCACTTTCACTTTCN
 A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTCGCCTTG
TGACCTTTGCCCTAN
 A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTTTCGCCTTG
-ACTTTCACTTTC
 A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTCGCCTTG
TGACCTTTGCCCTA-
 A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCTTTCGCCTTG
NNGCACCTTTCTCC---
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTCGCCTTG
KGCCCTTCCCCA---
 A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCTTTCGCCTTG
CACTTCCYCTTT-
 A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCTTTCGCCTTG-
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTCGCCTTG
TGACCTTTGCCCCA-
 A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTCGCCTTG
TGACCTCTGACCCCN
 A C G T A C G T A T G C A G T C A G T C A C G T A C G T A G C T A G T C A T C G A G T C G T A C G A C T A C G T A T C G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T