Information for 13-GGGCTCCCATGTC (Motif 20)

A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C G T C A A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G T C G T A C
p-value:1e-7
log p-value:-1.617e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 22.3bp
Average Position of motif in Background54.1 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGGCTCCCATGTC
TTGGGGGCGCCCCTAG-
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCTCCCATGTC
--GCTCCG-----
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGCTCCCATGTC--
-NGTTGCCATGGCAA
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGCTCCCATGTC--
-GGTTGCCATGGCAA
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGCTCCCATGTC
CNGTCCTCCC-----
 A C G T A C G T A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGCTCCCATGTC
-HTTTCCCASG--
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGCTCCCATGTC
GTGGGCCCCA----
 A C G T A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGCTCCCATGTC---
-KGTTGCCATGGCAAC
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGGCTCCCATGTC
--GGTCACATGAC
 A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGCTCCCATGTC
TTTGGCGCCAAA---
 A C G T A C G T A C T G A C T G A C T G A G T C A G C T A G T C A G T C A G T C C G T A A C G T A C T G A C G T A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T